Brings a smile to my face … #BioIT #HPC accelerator

Way way back in the early aughts (2000’s), we had built a set of designs for an accelerator system to speed up things like BLAST, HMMer, and other codes. We were told that no one would buy such things, as the software layer was good enough and people didn’t want black boxes. This was part […]

OpenLDAP + sssd … the simple guide

Ok. Here’s the problem. Small environment for customers, whom are not really sure what they want and need for authentication. Yes, they asked us to use local users for the machines. No, the number of users was not small. AD may or may not be in the picture. Ok, I am combining two sets of […]

Been there, done that, even have a patent on it

I just saw this about doing a divide and conquer approach to massive scale genomics calculation. While not specific to the code in question, it looked familiar. Yeah, I think I’ve seen something like this before … and wrote the code to do it. It was called SGI GenomeCluster. It was original and innovative at […]

When the revolution hits in force …

Our machines will be there, helping power the genomics pipelines to tremendous performance. Performance is an enabling feature. Without it you cannot even begin to hope to perform massive scale analytics. With it, you can dream impossible dreams. This article came out talking about a massive performance analytics pipeline at Nationwide Children’s Hospital in Ohio. […]

stateless booting

A problem I’ve been working on dealing with for a while has been the sad … well … no … terrible state of programmatically configured Linux systems, where the state is determined from a central (set of) source(s) via configuration databases, and NOT by local stateful configuration files. Madness lies in wait for those choosing […]

Inventory reduction @scalableinfo

Its that time of year, when the inventory fairies come out and begin their counting. Math isn’t hard, but the day job would like a faster and easier count this year. So, the day job is working on selling off existing inventory. We have 4 units ready to go out the door to anyone in […]

massive unapologetic firepower part 2 … the dashboard …

For Scalable Informatics Unison product. The whole system: Watching writes go by: Note the sustained 40+ GB/s. This is a single rack sinking this data, and no SSDs in the bulk data storage path. This dashboard is part of the day job’s FastPath product. Viewed 102213 times by 9365 viewers

Updated boot tech in Scalable OS (SIOS)

This has been an itch we’ve been working on scratching a few different ways, and its very much related to forgoing distro based installers. Ok, first the back story. One of the things that has always annoyed me about installing systems has been the fundamental fragility of the OS drive. It doesn’t matter if its […]