Finally got to use MCE::* in a project

There are a set of modules in the Perl universe that I’ve been looking for an excuse to use for a while. They are the MCE set of modules, which purportedly enable easy concurrency and parallelism, exploiting many core CPUs, and a number of techniques. Sure enough, I had a task to handle recently that […]

Brings a smile to my face … #BioIT #HPC accelerator

Way way back in the early aughts (2000’s), we had built a set of designs for an accelerator system to speed up things like BLAST, HMMer, and other codes. We were told that no one would buy such things, as the software layer was good enough and people didn’t want black boxes. This was part […]

Raw Unapologetic Firepower: kdb+ from @Kx

While the day job builds (hyperconverged) appliances for big data analytics and storage, our partners build the tools that enable users to work easily with astounding quantities of data, and do so very rapidly, and without a great deal of code. I’ve always been amazed at the raw power in this tool. Think of a […]

new SIOS feature: compressed ram image for OS

Most people use squashfs which creates a read-only (immutable) boot environment. Nothing wrong with this, but this forces you to have an overlay file system if you want to write. Which complicates things … not to mention when you overwrite too much, and run out of available inodes on the overlayfs. Then your file system […]